http://bkchem.zirael.org/wiki/ 2008-09-14T08:20:18+02:00 http://bkchem.zirael.org/wiki/ http://bkchem.zirael.org/wiki/lib/images/favicon.ico text/html 2008-09-12T19:50:05+02:00 beda http://bkchem.zirael.org/wiki/smiles_to_png_conversion?rev=1221241805&do=diff Smiles to PNG batch conversion Name smi2png.py OASA version 0.12.1 and higher Category file conversion Source Run as smi2png.png [filenames] This simple script takes all files given as arguments and converts them to the corresponding PNG bitmap files. It also generates an overview.html with all the results text/html 2008-09-12T15:56:32+02:00 tovrstra http://bkchem.zirael.org/wiki/batch_scripts?rev=1221227792&do=diff Batch scripts This page contains user-made scripts that can be used from command line to perform repetitive task in BKChem. The most common case is conversion between formats, but the possibilities are virtually unlimited. Yo use the scripts you just need to run BKChem with a -b switch and name of the batch script file: text/html 2008-06-11T07:31:40+02:00 beda http://bkchem.zirael.org/wiki/howtos?rev=1213162300&do=diff This page serves as a crossroad for howtos, articles, hints, and tricks that might prove useful for users of BKChem. Howtos * [Kludging BKChem] by Gary Bartholomew shows how wrestle BKChem to do what you want in a very nice and well commented tutorial. * looking for some general workflow tips? * oo-exporter-workflow points out some pitfalls you might encounter if you export to OpenOffice Draw file format. Other programs that you can use to create ODG files are listed there, too. * … text/html 2008-06-05T17:27:26+02:00 slow_eddy http://bkchem.zirael.org/wiki/talk:wiki:user:slow_eddy?rev=1212679646&do=diff Kludging BKChem. Email me for a 7-zipped pdf with the above title. It's quite big (about 1.5 MB unzipped), and it is what it says it is: Kludges. For instance to get dots all round a single atom (if your course requires this) is achieved by clicking in a single bond, then editing one of the atoms to be the atom you want. text/html 2008-05-26T14:42:43+02:00 martin http://bkchem.zirael.org/wiki/available_packages?rev=1211805763&do=diff Gentoo Linux Gentoo ebuild is provided with each release directly on the download page. OpenSUSE Several packages for this system were created by Rain_Maker: openSUSE 10.3, binary package 32 Bit: <http://www.pc-forum24.de/downloads.php?do=file&id=1107>